Project Details
Projekt
Shaping of viral gene expression and replication patterns by host responses during early infection with human polyomaviruses
Applicant
Professorin Dr. Nicole Brigitte Fischer
Subject Area
Virology
Term
since 2021
Project identifier
Deutsche Forschungsgemeinschaft (DFG) - Project number 443644894
Human polyomaviruses (hPyVs) establish a lifelong persistence, which is asymptomatic in the healthy immunocompetent host. Under immunosuppression, these viruses reactivate and cause life-threatening infections such as BK Virus (BKV)-associated nephropathy and Merkel cell polyomavirus (MCPyV) induced Merkel Cell Cancer (MCC). The molecular mechanisms involved in establishing and maintaining persistence are only poorly understood. hPyV persistence and reactivation comprise a complex interplay between viral and cellular factors, including immune response regulating mechanisms. BKV establishes persistence in renal tissue, presumably in permissive cells such as primary renal epithelial tubular cells. In contrast, no cell type has yet been identified that is permissive for productive MCPyV infection in vitro or in vivo. However, persistence has been demonstrated by multiple pieces of evidence. As a consequence, fundamental differences in the quality of persistence between these two viruses are currently discussed. While MCPyV persistence is thought to reflect a quasi-latent state with no viral protein expression and episomal genome maintenance, BKV persistence presumably involves ongoing productive virus replication. The central question of the project is how hPyVs such as BKV and MCPyV establish and maintain persistence by (i) manipulating the host responses and (ii) applying molecular strategies to preserve the genome beyond cell division. By using chromatin immunoprecipitation sequencing (ChIP-Seq), RNA-Seq, and higher order chromatin organization studies (3C-Seq and ChIA-PET-Seq), we will study the function and regulation of MCPyV and in a putative 2nd funding period BKV-encoded viral factors and the host response, e.g. the cellular immune response responsible for establishment and maintenance of persistent infection.
DFG Programme
Research Units
