SFB 765:
Multivalency as Chemical Organisation and Action Principle: New Architectures, Functions and
Applications
Subject Area
Chemistry
Biology
Mathematics
Medicine
Physics
Term
from 2008 to 2019
Project identifier
Deutsche Forschungsgemeinschaft (DFG) - Project number 32049920
Final Report Year
2020
Final Report Abstract
Multivalence is a key principle in nature for building strong but reversible chemical interactions between
two entities, e.g. receptors and ligands, viruses and cells or between two cell surfaces. Multivalent
binding is based on several simultaneous molecular recognition processes, which are mediated either
by uniform non-covalent interactions (homomultivalence) or by several different non-covalent
interactions (heteromultivalence).
Multivalence plays a decisive role, for example, in the self-organization of matter, in catalysis, and in
biological systems for recognition, adhesion, and signal processes. Simultaneous multivalent
interactions of several ligands form a multivalent ligand system at a corresponding multivalent receptor
that can cause significant amplifications of binding constants and thus dramatically enhanced binding
on a molecular scale, so that equilibria are shifted completely in favor of the formed complexes. The
targeted design of new multivalent molecules is of great importance for important biological questions,
e.g. for the inhibition of inflammation and the prevention of viral infections, as well as for the targeted
synthesis of functional molecule architectures, surface structures or controlled nanoparticle interactions.
The chemical and biological mechanisms and the influence of differently dimensioned scaffold
architectures, which underlie these multivalent interactions, have been the central topic of the SFB 765.
Trend-setting successes were achieved in the first two funding periods. The experimental and theoretical
investigation of bivalent and trivalent binding systems in the gas phase, in solution and on surfaces was
successful. In some cases, it was also possible to precisely correlate quantitative data between theory
and experiment. The research also showed the importance of size, shape, flexibility and dynamics of
the scaffold architecture, especially for the planar interaction with biological systems. The success is
illustrated by the development of a multivalent drug candidate with strong anti-inflammatory activity and
highly potent pathogen inhibition. In the third funding period of the SFB 765, a further strengthening of
the SFB 765 with regard to application-oriented projects was planned in addition to a focus on organic
framework architectures of "soft matter". Multivalent pathogen inhibitors were investigated, which was
very forward-looking with regard to the current virus pandemic and provided many useful hints for the
design of novel virus inhibitors.
A deeper understanding of multivalent interactions on all length scales from the nano- to the micrometer
range is crucial for answering central questions and new developments in the field of bio- and material
sciences. To accomplish this highly complex and long-term task, the interdisciplinary cooperation of
natural scientists with different expertise from biochemistry to theory is necessary. Freie Universität
Berlin, Humboldt-University, Technical University of Berlin, Leibniz Institute for Molecular
Pharmacology, Charité-Universitätsmedizin Berlin, MPI for Colloids and Interfaces, Zuse Institute Berlin
and, in the third funding period, the Robert Koch Institute have developed great expertise and strong
scientific interactions in the investigation of functional molecular aggregates to answer questions from
the life and materials sciences. In the third funding period of the SFB 765, the areas of Pharmaceutical
Chemistry and Theoretical Chemistry/Biophysics have been specifically strengthened by the
appointments of recent years, in order to deepen the multifaceted and important topic of "Multivalence".
The special charm of SFB 765 was the unique interaction of synthetic expertise, physico-chemically and
theoretically oriented projects with biologically inspired questions, which led to a new quality of
understanding of multivalence and put it on a precise theoretical basis, enabling medical issues such as
inflammation, bacterial and viral infections to be more specifically addressed for future applications.
Through these precise measurements and modelling, the SFB 765 has also succeeded in further
developing a quantitative understanding of the multivalency at biological interfaces, especially of
viruses. The precisely fitting interaction of DNA-, polymer- and phage-based scaffold architectures has
resulted in the best binding constants, which is also of great importance for future applications of
multivalence. With these long-term and extremely interesting research perspectives, the SFB 765 has
further expanded its pioneering function in Germany and internationally in the third funding period.
Publications
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Proc Natl Acad Sci USA, 2010, 107, 19679
J. Dernedde, A. Rausch, M. Weinhart, S. Enders, R. Tauber, K. Licha, M. Schirner, U. Zügel, A. von Bonin and R. Haag
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ChemBioChem, 2011, 12, 2587-2598
M. Shan, A. Bujotzek, F. Abendroth, A. Wellner, R. Gust, O. Seitz, M. Weber and R. Haag
-
Org. Biomol. Chem., 2011, 9, 7448-7456
M. Roskamp, S. Enders, F. Pfrengle, S. Yekta, V. Dekaris, J. Dernedde, H.-U. Reissig and S. Schlecht
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Chem. Commun., 2012, 48, 522-524
L. M. Artner, L. Merkel, N. Bohlke, F. Beceren-Braun, C. Weise, J. Dernedde, N. Budisa and C. P. R. Hackenberger
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J. Am. Chem. Soc., 2012, 134, 20490-20497
M. Schade, A. Knoll, A. Vogel, O. Seitz, J. Liebscher, D. Huster, A. Herrmann and A. Arbuzova
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PLOS ONE, 2013, 8, e82352
P. Majkut, I. Claußnitzer, H. Merk, C. Freund, C. P. R. Hackenberger and M. Gerrits
-
Adv. Healthc. Mater., 2015, 4, 2154-2162
S. Reimann, D. Gröger, C. Kühne, S. B. Riese, J. Dernedde and R. Haag
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Beilstein J. Org. Chem., 2015, 11, 784-791
M. Mühlberg, M. G. Hoesl, C. Kuehne, J. Dernedde, N. Budisa and C. P. R. Hackenberger
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Beilstein J. Org. Chem., 2015, 11, 837-847
K. Koschek, V. Durmaz, O. Krylova, M. Wieczorek, S. Gupta, M. Richter, A. Bujotzek, C. Fischer, R. Haag, C. Freund, M. Weber and J. Rademann
-
Biomacromolecules, 2015, 16, 2188-2197
E. Zacco, C. Anish, C. E. Martin, H. v. Berlepsch, E. Brandenburg, P. H. Seeberger and B. Koksch
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ChemBioChem, 2015, 16, 742-745
J. Völler, H. Biava, B. Koksch, P. Hildebrandt and N. Budisa
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J. Am. Chem. Soc., 2015, 137, 2572-2579
J. Vonnemann, S. Liese, C. Kuehne, K. Ludwig, J. Dernedde, C. Böttcher, R. R. Netz and R. Haag
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Linear polyglycerol derivatives, a method for manufacturing and applications, EP16153144.7A, 2016
R. Haag, A. Herrmann, S. Bhatia and D. Lauster
-
Mol. Cell. Proteomics, 2015, 14, 2961
B. Kuropka, A. Witte, J. Sticht, N. Waldt, P. Majkut, C. P. R. Hackenberger, B. Schraven, E. Krause, S. Kliche and C. Freund
-
Adv. Healthc. Mater., 2016, 5, 2922-2930
B. Ziem, H. Thien, K. Achazi, C. Yue, D. Stern, K. Silberreis, M. F. Gholami, F. Beckert, D. Gröger, R. Mülhaupt, J. P. Rabe, A. Nitsche and R. Haag
-
Angew. Chem. Int. Ed., 2016, 55, 15510-15514
S. Köhling, M. P. Exner, S. Nojoumi, J. Schiller, N. Budisa and J. Rademann
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Bioorthogonale 3d-in situ-hydrogele in Form eines auf einem Träger immobilisierten Netzwerks für Biosensoren sowie Verfahren zu deren Herstellung, Germany Pat., DE102017112012A1, 2016
R. Haag, L. Kaufmann and U. Schedler
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Chem. Eur. J., 2016, 22, 15475-15484
L. K. S. von Krbek, A. J. Achazi, M. Solleder, M. Weber, B. Paulus and C. A. Schalley
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Nano Lett., 2016, 16, 807-811
C.-H. Lai, J. Hütter, C.-W. Hsu, H. Tanaka, S. Varela-Aramburu, L. De Cola, B. Lepenies and P. H. Seeberger
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Novel furazan-3-carboxylic acid derivatives and use thereof in treatment of cancer. EP16192394, 2016
J. Rademann, E. L. Wong, C. Arkona, B. G. Kim and E. Nawrotzky
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ACS Nano, 2017, 11, 702-712
S. Liese, M. Gensler, S. Krysiak, R. Schwarzl, A. Achazi, B. Paulus, T. Hugel, J. P. Rabe and R. R. Netz
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Angew. Chem. Int. Ed., 2017, 56, 5931-5936
D. Lauster, M. Glanz, M. Bardua, K. Ludwig, M. Hellmund, U. Hoffmann, A. Hamann, C. Böttcher, R. Haag, C. P. R. Hackenberger and A. Herrmann
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Biomaterials, 2017, 138, 22-34
S. Bhatia, D. Lauster, M. Bardua, K. Ludwig, S. Angioletti-Uberti, N. Popp, U. Hoffmann, F. Paulus, M. Budt, M. Stadtmüller, T. Wolff, A. Hamann, C. Böttcher, A. Herrmann and R. Haag
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Chem. Eur. J., 2017, 23, 2877-2883
L. K. S. von Krbek, A. J. Achazi, S. Schoder, M. Gaedke, T. Biberger, B. Paulus and C. A. Schalley
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Chem. Eur. J., 2017, 23, 2960-2967
H. V. Schröder, H. Hupatz, A. J. Achazi, S. Sobottka, B. Sarkar, B. Paulus and C. A. Schalley
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Chem. Soc. Rev., 2017, 46, 2622-2637
L. K. S. von Krbek, C. A. Schalley and P. Thordarson
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J. Am. Chem. Soc., 2017, 139, 16389-16397
V. Bandlow, S. Liese, D. Lauster, K. Ludwig, R. R. Netz, A. Herrmann and O. Seitz
-
Pentafluorophosphate derivative, its uses and an appropriate manufacturing method. EP 17190937.7, 2017
J. Rademann, S. Wagner and M. Accorsi
-
Angew. Chem. Int. Ed., 2018, 57, 14121-14124
L. K. S. von Krbek, D. A. Roberts, B. S. Pilgrim, C. A. Schalley and J. R. Nitschke
-
Coating compound and coating arrangement. Deutschland Pat., EP3263623A1, 2018
R. Haag, M. Weinhart, Q. Wei and L. Yu
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Nanoscale, 2018, 10, 21425-21433
H. V. Schröder, A. Mekic, H. Hupatz, S. Sobottka, F. Witte, L. H. Urner, M. Gaedke, K. Pagel, B. Sarkar, B. Paulus and C. A. Schalley
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Small, 2018, 14, 1800189
I. Donskyi, M. Drüke, K. Silberreis, D. Lauster, K. Ludwig, C. Kühne, W. Unger, C. Böttcher, A. Herrmann, J. Dernedde, M. Adeli and R. Haag
-
Angew. Chem. Int. Ed., 2019, 58, 3496-3500
H. V. Schröder, F. Stein, J. M. Wollschläger, S. Sobottka, M. Gaedke, B. Sarkar and C. A. Schalley
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Biophys. J., 2019, 116, 1037-1048
V. Reiter-Scherer, J. L. Cuellar-Camacho, S. Bhatia, R. Haag, A. Herrmann, D. Lauster and J. P. Rabe
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Computation, 2019, 7
F. Erlekam, S. Igde, S. Röblitz, L. Hartmann and M. Weber
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Nano Letters, 2019, 19, 1875-1882
M. Müller, D. Lauster, H. H. K. Wildenauer, A. Herrmann and S. Block
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Small, 2019, 15, 1805430
G. Guday, I. S. Donskyi, M. F. Gholami, G. Algara-Siller, F. Witte, A. Lippitz, W. E. S. Unger, B. Paulus, J. P. Rabe, M. Adeli and R. Haag
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Angew. Chem. Int. Ed., 2020
K. Achazi, R. Haag, M. Ballauff, J. Dernedde, J. N. Kizhakkedathu, D. Maysinger and G. Multhaup
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Angew. Chem. Int. Ed., 2020
G. Bachem, E.-C. Wamhoff, K. Silberreis, D. Kim, H. Baukmann, F. Fuchsberger, J. Dernedde, C. Rademacher and O. Seitz
-
Angew. Chem. Int. Ed., 2020, 59, 12417-12422
S. Bhatia, J. L. Cuellar-Camacho, M. Hilsche, C. Nie, B. Parshad, K. Ludwig, D. Lauster, A. Sharma, C. Böttcher, A. Herrmann and R. Haag
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Angew. Chem. Int. Ed., 2020, 59, 8776-8785
D. J. Mikolajczak, A. A. Berger and B. Koksch
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J. Am. Chem. Soc., 2020, 142, 12181-12192
J. L. Cuellar-Camacho, S. Bhatia, V. Reiter-Scherer, D. Lauster, S. Liese, J. P. Rabe, A. Herrmann and R. Haag
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Langmuir, 2020, 36, 4827-4834
M. Schmudde, C. Grunewald, T. Risse and C. Graf
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Nano Lett., 2020, 20, 5367-5375
C. Nie, M. Stadtmüller, H. Yang, Y. Xia, T. Wolff, C. Cheng and R. Haag
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Nat. Nanotechnol., 2020, 15, 373–379
D. Lauster, S. Klenk, K. Ludwig, S. Nojoumi, S. Behren, L. Adam, M. Stadtmüller, S. Saenger, S. Zimmler, K. Hönzke, L. Yao, U. Hoffmann, M. Bardua, A. Hamann, M. Witzenrath, L.-E. Sander, T. Wolff, N. Budisa, R. R. Netz, C. Böttcher, S. Liese, A. Herrmann and C. P. R. Hackenberger
DFG Programme
Collaborative Research Centres
Completed projects
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A01 - Multivalency as structure-defining principle for the generation of functional supramolecules
(Project Head
Schalley, Christoph A.
)
-
A02 - Multivalent pyridine derivatives
(Project Head
Reißig, Hans-Ulrich
)
-
A03 - External control of multivalent interactions
(Project Head
Hecht, Stefan
)
-
A04 - Adjusting the multivalent interaction of organic-inorganic hybrid nanoparticles with high relative interaction surfaces
(Project Heads
Graf, Christina
;
Schlecht, Sabine
)
-
A05 - Peptide models for generation and control of multivalent interactions
(Project Heads
Koksch, Beate
;
Schlecht, Sabine
)
-
A06 - Syntheses of biofunctional scaffold architectures for multivalent interactions
(Project Head
Haag, Rainer
)
-
B01 - Nucleic acid-ligand conjugates - Precision tools for high affinitry and high specificity interactions in Chemistry and Biology
(Project Head
Seitz, Oliver
)
-
B03 - Syntheses, structures, and properties of new carbohydrate mimetics
(Project Head
Reißig, Hans-Ulrich
)
-
B04 - Multivalent modulation of clathrin-mediated endocytosis
(Project Head
Haucke, Ph.D., Volker
)
-
B05 - Functional peptide- and protein conjugates for multivalent targeting in vitro and in vivo
(Project Heads
Budisa, Nediljko
;
Hackenberger, Christian
)
-
B06 - Synthesis of spacer-bridged, bivalent estrogen analogs and study of their DNA modulation
(Project Heads
Gust, Ronald
;
Haag, Rainer
)
-
B07 - Interaction of adjustable ligand-conjugates with biological systems
(Project Heads
Dernedde, Jens
;
Tauber, Rudolf
)
-
B08 - Syntheses of complex glycoligands and characterization of multivalent C-type lectinreceptor/carbohydrate-interactions
(Project Heads
Lepenies, Bernd
;
Seeberger, Peter H.
)
-
B09 - Multivalent ligands for adaptive intracellular protein receptors
(Project Head
Rademann, Jörg
)
-
B10 - Multivalency and geometric organization of binding sites as mechanism for the cellular entry by viruses
(Project Head
Ewers, Helge
)
-
C01 - Modeling and simulation of multivalent ligand binding
(Project Head
Knapp, Ernst-Walter
)
-
C02 - No-equilibrium kinetics of multivalent binding processes
(Project Head
Weber, Marcus
)
-
C03 - Binding forces in quasi one- and two- dimensional geometries
(Project Head
Rabe, Jürgen P.
)
-
C04 - Multivalent interactions of WW and SH2 domains containing proteins
(Project Heads
Freund, Christian
;
Oschkinat, Hartmut
)
-
C05 - Control of multivalent interactions by radiation pulses and multivalent binding of biological model systems to nanoparticles
(Project Head
Rühl, Eckart
)
-
C06 - Characterization and optimization of multivalent ligand interactions with viral glycoptoteins
(Project Heads
Böttcher, Christoph
;
Herrmann, Andreas
;
Wolff, Thorsten
)
-
C07 - Ab initio calculations of electronic effects in multivalent interactions
(Project Head
Paulus, Beate
)
-
C09 - Simulationen und Multiskalenmodellierung von multivalenten Zucker-Protein-Wechselwirkungen
(Project Head
Netz, Roland
)
-
C10 - Structural determinants of multivalent binding dynamics
(Project Head
Keller, Bettina
)
-
MGK - Multivalency in Chemistry and Biochemistry
(Project Heads
Hackenberger, Christian
;
Paulus, Beate
)
-
T01 - Preclinical evaluation of dPGS and generation of a medical grade batch
(Project Heads
Dernedde, Jens
;
Haag, Rainer
)
-
Z01 - SFB administration
(Project Head
Haag, Rainer
)
-
Z02 - Core service facilities for the SFB 765: NMR spectroscopy, surface plasmon resonance, quartz crystal microbalance, calorimetry, and mass spectrometry
(Project Heads
Dernedde, Jens
;
Freund, Christian
;
Haag, Rainer
;
Risse, Thomas
;
Schalley, Christoph A.
)