The molecular basis of VWF mechano-sensoring: Structure and interactions of VWF domains as the basis for regulation and aggregation

Applicant Professorin Dr. Frauke Gräter
Subject Area Bioinformatics and Theoretical Biology
Biophysics
Term from 2011 to 2017
Project identifier Deutsche Forschungsgemeinschaft (DFG) - Project number 172540668
 

Project Description

The function of von Willebrand factor, including adhesion and network formation, is tightly regulated by mechanical force, the molecular mechanism of which has remained elusive to a large extent. We recently have successfully put forward a new mechanism for the force-dependence of the VWF-platelet interaction. In this scenario, which is validated by experiments, VWF A1-GPIb binding is inhibited by a specific A1-A2 interaction, which is relieved by force due to shear flow. In the second funding period, we will extend our approach combining molecular modeling and Force-probe Molecular Dynamics simulations to the interaction of VWF A1 and A3 with collagen, for which we hypothesize a similar scenario. Secondly, as a major step towards a comprehensive understanding of the force-sensoring function of VWF, we aim at structural models and dynamic data under force of the C and D domains of VWF. We will attempt to explain on a molecular level the observed increased aggregation of VWF carrying polymorphism in the C4 domain. Finally, we will develop a coarse-grained Go-type polymer model, in which disulfide bonds can be reversibly broken and formed, in order to decipher mechanisms of force-dependent disulfide bond shuffling in D-domains, which carry protein disulfide isomerase motifs. Our work will contribute to the molecular-level understanding of how collective networks of wild-type and mutant VWF map to clinical presentation.
DFG Programme Research Units
Subproject of FOR 1543:  Shear Flow Regulation of Hemostasis - Bridging the Gap between Nanomechanics and Clinical Presentation
Co-Investigator Privatdozent Dr. Carsten Baldauf